New burn-in day setting and Management parameters
Run.prm
To allow for more flexibke initialisation of the model the following has been added to the run.prm file (note in most cases this shold be set to 1 day)
tburnday 1 day # period of time want to use as burn-in (using read-in distributions to initialise fisheries etc)
Harvest.prm
The following parameters have been added to allow for more fleible management options (both for forced and MSE management evaluations):
This sets the start date for fishery managment in days after the start of the run
midwcCEP_start_manage 0 0
jigCEP_start_manage 0 0
midwcFP_start_manage 0 0
dredgeBFS_start_manage 0 0
netFD_start_manage 0 0
netSH_start_manage 0 0
plineFVO_start_manage 0 0
pseineFVO_start_manage 0 0
pseineFP_start_manage 0 0
trapBMS_start_manage 0 0
trapFD_start_manage 0 0
dtrawlBMS_start_manage 0 0
dtrawlCEP_start_manage 0 0
dtrawlFD_start_manage 0 0
dtrawlFDB_start_manage 0 0
dtrawlFDO_start_manage 0 0
midwcFD_start_manage 0 0
dseineFDB_start_manage 0 0
dlineFD_start_manage 0 0
dlineFVS_start_manage 0 0
dlineSH_start_manage 0 0
diveBG_start_manage 0 0
pseineFVS_start_manage 0 0
cullPIN_start_manage 0 0
REC_start_manage 0 0
ptrawlPWN_start_manage 0 0
dtrawlFBP_start_manage 0 0
midwcZL_start_manage 0 0
trapFDE_start_manage 0 0
dlineFDE_start_manage 0 0
netFDE_start_manage 0 0
midwcPWN_start_manage 0 0
mowMA_start_manage 0 0
This sets the end date for fishery management in days after the start of the run
midwcCEP_end_manage 1000000000 1000000000
jigCEP_end_manage 1000000000 1000000000
midwcFP_end_manage 1000000000 1000000000
dredgeBFS_end_manage 1000000000 1000000000
netFD_end_manage 1000000000 1000000000
netSH_end_manage 1000000000 1000000000
plineFVO_end_manage 1000000000 1000000000
pseineFVO_end_manage 1000000000 1000000000
pseineFP_end_manage 1000000000 1000000000
trapBMS_end_manage 1000000000 1000000000
trapFD_end_manage 1000000000 1000000000
dtrawlBMS_end_manage 1000000000 1000000000
dtrawlCEP_end_manage 1000000000 1000000000
dtrawlFD_end_manage 1000000000 1000000000
dtrawlFDB_end_manage 1000000000 1000000000
dtrawlFDO_end_manage 1000000000 1000000000
midwcFD_end_manage 1000000000 1000000000
dseineFDB_end_manage 1000000000 1000000000
dlineFD_end_manage 1000000000 1000000000
dlineFVS_end_manage 1000000000 1000000000
dlineSH_end_manage 1000000000 1000000000
diveBG_end_manage 1000000000 1000000000
pseineFVS_end_manage 1000000000 1000000000
cullPIN_end_manage 1000000000 1000000000
REC_end_manage 1000000000 1000000000
ptrawlPWN_end_manage 1000000000 1000000000
dtrawlFBP_end_manage 1000000000 1000000000
midwcZL_end_manage 1000000000 1000000000
trapFDE_end_manage 1000000000 1000000000
dlineFDE_end_manage 1000000000 1000000000
netFDE_end_manage 1000000000 1000000000
midwcPWN_end_manage 1000000000 1000000000
mowMA_end_manage 1000000000 1000000000
If using US style MSY-based management set the tier for the species to 6, but you will also need to have the following in the param file
When using MSY based management (tier6 above), then this identifies the lever to use for each group
None 0
Effort 1
Catch (quota) 2 (Will require meaningful values in the TAC_XX parameter arrays below)
Spatial management 3 (Will require meaningful values in the MPA_YY parameter arrays below)
Season 4 (Will require meaningful seasonopen and seasonclose values below)
Gear 5
YY_FC_restrict will also require a meaningful value (as that is the value used when fishery in recovery mode)
UseLever 47
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Whether to rescale fisheries management levers based on minimum across species (1) or the average (0)
midwcCEP_use_min_lever 0 0
jigCEP_use_min_lever 0 0
midwcFP_use_min_lever 0 0
dredgeBFS_use_min_lever 0 0
netFD_use_min_lever 0 0
netSH_use_min_lever 0 0
plineFVO_use_min_lever 0 0
pseineFVO_use_min_lever 0 0
pseineFP_use_min_lever 0 0
trapBMS_use_min_lever 0 0
trapFD_use_min_lever 0 0
dtrawlBMS_use_min_lever 0 0
dtrawlCEP_use_min_lever 0 0
dtrawlFD_use_min_lever 0 0
dtrawlFDB_use_min_lever 0 0
dtrawlFDO_use_min_lever 0 0
midwcFD_use_min_lever 0 0
dseineFDB_use_min_lever 0 0
dlineFD_use_min_lever 0 0
dlineFVS_use_min_lever 0 0
dlineSH_use_min_lever 0 0
diveBG_use_min_lever 0 0
pseineFVS_use_min_lever 0 0
cullPIN_use_min_lever 0 0
REC_use_min_lever 0 0
ptrawlPWN_use_min_lever 0 0
dtrawlFBP_use_min_lever 0 0
midwcZL_use_min_lever 0 0
trapFDE_use_min_lever 0 0
dlineFDE_use_min_lever 0 0
netFDE_use_min_lever 0 0
midwcPWN_use_min_lever 0 0
mowMA_use_min_lever 0 0